Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015834935.1_cds_XP_016505766.1_19067
CDS Infomation

[gene=LOC107823590] [db_xref=GeneID:107823590] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016505766.1] [location=complement(join(12672..12703,14316..15753,16686..16772))] [gbkey=CDS]
Sequence

ATGGCAAACAATACTGAGATTGTTCCACTAGATCATCGAATTGCACTATCTGATCAAAAT
CCTCTAAGAGAAGCTAAGAAAGATGAGATAGAAGAAGTGAGGAAAGTGGCCCATTTAATC
GAGAAAAAGGAAACAAGTGGTCAAGATCAATTGGCATTACAAACTAAAAAATCTGCAAAT
CAAATCTTTGAGGAAAAGGTCAAGGACATGGACAATTCGTCTATCAAATCCACTACCATA
TTCAAAGTAAATGTTTGCTTACGTGAATCAAATTCAAAGGCTTATACTCCAAAGACTATC
TCTATTGGTCCTTACCATAACAAAAGACCACAACTTGGCTCAATGGAAAAATACAAATGG
CTGTACCTACAACGGTTTCTCAAACGAAAAACAGAGATTGATGTGAAAAGTTACATTAAT
GAAATGGAGAAACTAAAAGATAAAGCACTAAAGTGTTACGATGATAACCTTGACAGTGAC
ATTGTTGTCAAATTTTCACAAATGTTGTTGCTTGATGGTTGTTTTGTGGTTGAGTTTATT
CGAGAGCGTTGTGTTGTTGAGCCAGAAGAATCCAACCAAATTATCAACTTGGAATGGATG
ATAAATCAAGTATGTCTAGACATGGTGTTACTAGAAAACCAACTGCCTTTCTTTGTTCTC
ACCATGCTACATGACATGACAAAGAATCCTACAGAACGAAGCTTCTTGAATATGGTGAGA
ACGACATTACTTGATATTTTCCCAAAAGTGACATTTATGCCACCATCAGAAATCGACGAT
TTGAATGCAGAAAACATCGACCACTTACTAGATGCAGTACACATGTTTTGTCGCCCATCA
CATGATCAGAAAACTAGAGAAACCAAGAATGCTAGCAGCAGGGGAAAGGAATGTTGCAAA
ATAAGTTTCTGTGGGAACATTTTGCAATTAACCAGGTCAAAAGAAATACCCGATGTCCTT
GATTTATGGGATTGCTATCATATTCCAAGTGCAACGGAGCTTTATAATGCTGGAGTTAGC
TTCTCAAAAATAGGAAGCGTGGCGGAAGATGTGAACGATAAAACAACTTTATTCGATATC
AACTTCGAAAAGGGGTTAATGAAAATCCCATGTTTCACAATCGAGGATACTATGGAAACC
TTCATGCGAAATTTAATAGCTTATGAGCAACATTCTTCTGGTGCATATCCTTATTTTTCG
AATTATGCTCATATAATGACTCAACTTATTGGCTCACATAGAGATGTGAATCTCCTTCGC
CAAAATAAAATCATCCTTAAAGATCTAGGAGATGACAAAGAAGTGGCCAGCATCTTCAAG
AAACTTTCAAGTGGAGTGATAGTCACTGACTTCTATTACAGAGAAGAATGCAGCAAATTG
ATCCAACATTGTGAAAAGCCATGGAGTCAAATGATGGCAAGTTTGAGGCACAATTATTTT
CAGAGTCCTTGGGCTGGAGCTTCAACTGTGGCAGCCATCACACTTCTCATACTCACAGTT
ATACAGACAATTCTAGCTTTCAAAGAAAACCAAAAGAAAAGAAAACAAGACTTTTGA

Peptide Sequence

PEP ID

XP_016505766.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MANNTEIVPLDHRIALSDQNPLREAKKDEIEEVRKVAHLIEKKETSGQDQLALQTKKSAN
QIFEEKVKDMDNSSIKSTTIFKVNVCLRESNSKAYTPKTISIGPYHNKRPQLGSMEKYKW
LYLQRFLKRKTEIDVKSYINEMEKLKDKALKCYDDNLDSDIVVKFSQMLLLDGCFVVEFI
RERCVVEPEESNQIINLEWMINQVCLDMVLLENQLPFFVLTMLHDMTKNPTERSFLNMVR
TTLLDIFPKVTFMPPSEIDDLNAENIDHLLDAVHMFCRPSHDQKTRETKNASSRGKECCK
ISFCGNILQLTRSKEIPDVLDLWDCYHIPSATELYNAGVSFSKIGSVAEDVNDKTTLFDI
NFEKGLMKIPCFTIEDTMETFMRNLIAYEQHSSGAYPYFSNYAHIMTQLIGSHRDVNLLR
QNKIILKDLGDDKEVASIFKKLSSGVIVTDFYYREECSKLIQHCEKPWSQMMASLRHNYF
QSPWAGASTVAAITLLILTVIQTILAFKENQKKRKQDF

Transcript Sequence

Gene sequence data has not been registered.